approx_theta_post_s2 {hahmmr} | R Documentation |
Find optimal theta of a CNV segment using forward-backward; uses a 2-state allele HMM
Description
Find optimal theta of a CNV segment using forward-backward; uses a 2-state allele HMM
Usage
approx_theta_post_s2(
pAD,
DP,
R,
p_s,
upper = 0.499,
start = 0.25,
gamma = 20,
r = 0.015
)
[Package hahmmr version 1.0.0 Index]