calc_trans_mat_s7 {hahmmr} | R Documentation |
Calculate the transition matrix for 7-state joint HMM
Description
Calculate the transition matrix for 7-state joint HMM
Usage
calc_trans_mat_s7(t, p_s, w, states_cn, states_phase)
Arguments
t |
numeric; CNV state transition probability |
p_s |
numeric; phase switch probability |
w |
numeric; relative abundance of states |
states_cn |
character; CNV states |
states_phase |
character; haplotype phase states |
Value
array; transition matrix
[Package hahmmr version 1.0.0 Index]