filter_genes {hahmmr}R Documentation

filter for mutually expressed genes

Description

filter for mutually expressed genes

Usage

filter_genes(count_mat, lambdas_ref, gtf, verbose = FALSE)

Arguments

count_mat

dgCMatrix Gene expression counts

lambdas_ref

named numeric vector A reference expression profile

gtf

dataframe Transcript gtf

Value

vector Genes that are kept after filtering


[Package hahmmr version 1.0.0 Index]